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git-quiltimport did not like it when a patch described in the series file does not exist.
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p4 importer missed executable bit in some cases.
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The default shell on some FreeBSD did not execute the argument parsing code correctly and made git unusable.
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git-svn incorrectly spawned pager even when the user explicitly asked not to.
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sample post-receive hook overquoted the envelope sender value.
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git-am got confused when the patch contained a change that is only about type and not contents.
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git-mergetool did not show our and their version of the conflicted file when started from a subdirectory of the project.
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git-mergetool did not pass correct options when invoking diff3.
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git-log sometimes invoked underlying "diff" machinery unnecessarily.