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Document batch overview - #8

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djmarques merged 1 commit into
DiseaseTranscriptomicsLab:mainfrom
djmarques:main
Jul 16, 2026
Merged

Document batch overview#8
djmarques merged 1 commit into
DiseaseTranscriptomicsLab:mainfrom
djmarques:main

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This pull request refactors and documents the batch_overview Shiny module, improving code clarity, maintainability, and user experience. The main changes include reorganizing imports, enhancing documentation, restructuring the calculation and display of batch metrics, and improving error handling and UI responsiveness.

Code organization and import handling:

  • Reorganized imports, added detailed comments, and introduced _add_import_path to ensure the circStudio package is reliably imported, improving code clarity and maintainability.

Documentation and code clarity:

  • Added comprehensive docstrings and inline comments throughout the module to explain the purpose, parameters, and return values of functions, as well as the logic behind key code blocks. [1] [2]
  • Grouped code sections with clear headers to separate metric calculation, UI, and server logic. [1] [2]

@djmarques
djmarques merged commit c139876 into DiseaseTranscriptomicsLab:main Jul 16, 2026
@djmarques djmarques self-assigned this Jul 16, 2026
@djmarques djmarques added the documentation Improvements or additions to documentation label Jul 16, 2026
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